Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 RBPMS2P1-201ENST00000437762 623 ntBASIC18.63■□□□□ 0.57
TIFAQ96CG3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 STK25P1-201ENST00000585406 838 ntBASIC18.63■□□□□ 0.57
TIFAQ96CG3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TIFAQ96CG3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIFAQ96CG3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 GPS2P2-201ENST00000430745 888 ntBASIC18.62■□□□□ 0.57
TIFAQ96CG3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 AL596325.1-201ENST00000563991 1082 ntBASIC18.62■□□□□ 0.57
TIFAQ96CG3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
TIFAQ96CG3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIFAQ96CG3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 ATP5G2P4-201ENST00000442175 420 ntBASIC18.61■□□□□ 0.57
TIFAQ96CG3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIFAQ96CG3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TIFAQ96CG3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TIFAQ96CG3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.6■□□□□ 0.57
TIFAQ96CG3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.6■□□□□ 0.57
TIFAQ96CG3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.6■□□□□ 0.57
TIFAQ96CG3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.6■□□□□ 0.57
TIFAQ96CG3 RN7SL692P-201ENST00000464677 288 ntBASIC18.6■□□□□ 0.57
TIFAQ96CG3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIFAQ96CG3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.6■□□□□ 0.57
TIFAQ96CG3 AL158211.3-201ENST00000607385 239 ntBASIC18.6■□□□□ 0.57
TIFAQ96CG3 AL662799.1-202ENST00000614205 422 ntBASIC18.6■□□□□ 0.57
TIFAQ96CG3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms