Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 AC073508.3-201ENST00000619697 1419 ntBASIC19.77■□□□□ 0.76
SMARCE1Q969G3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 AC068472.1-201ENST00000474589 881 ntBASIC19.77■□□□□ 0.76
SMARCE1Q969G3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCE1Q969G3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCE1Q969G3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 HBZP1-201ENST00000354915 429 ntBASIC19.76■□□□□ 0.75
SMARCE1Q969G3 KRT18P38-201ENST00000449496 1282 ntBASIC19.76■□□□□ 0.75
SMARCE1Q969G3 AL359075.1-203ENST00000462729 1002 ntBASIC19.76■□□□□ 0.75
SMARCE1Q969G3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.76■□□□□ 0.75
SMARCE1Q969G3 AC073912.3-201ENST00000624414 853 ntBASIC19.76■□□□□ 0.75
SMARCE1Q969G3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCE1Q969G3 AC016396.2-201ENST00000562575 1417 ntBASIC19.76■□□□□ 0.75
SMARCE1Q969G3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 AC005521.1-201ENST00000393351 872 ntBASIC19.75■□□□□ 0.75
SMARCE1Q969G3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCE1Q969G3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms