Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 JPT2-203ENST00000382711 894 ntTSL 4 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 BOLA2P3-201ENST00000404566 256 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC098850.1-201ENST00000419919 790 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC123567.1-201ENST00000548294 1261 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 MIR5189-201ENST00000577370 114 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC073352.2-201ENST00000609385 439 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 FNTAP2-201ENST00000430308 634 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC055876.2-201ENST00000531834 546 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC008267.7-201ENST00000624570 1194 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC068587.3-201ENST00000526613 355 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AL049796.1-201ENST00000565336 1766 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 WFDC1-204ENST00000613603 549 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 MIR6816-201ENST00000620368 66 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 CU633904.3-201ENST00000624042 1029 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC005695.3-201ENST00000614522 232 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 NSD1-211ENST00000511258 809 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC244452.3-201ENST00000636814 210 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC132938.6-201ENST00000623828 1655 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 RPL37AP1-201ENST00000412502 279 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 BRI3P1-201ENST00000440440 378 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 Z98882.1-201ENST00000622160 2253 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms