Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 AC093677.2-201ENST00000600169 1863 ntBASIC28.12■■■□□ 2.09
CHMP7Q8WUX9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC28.11■■■□□ 2.09
CHMP7Q8WUX9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 AL135999.2-201ENST00000622438 1686 ntBASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 AFG3L1P-217ENST00000557444 2447 ntBASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 AP000842.3-202ENST00000569238 1080 ntBASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 TP53TG3HP-202ENST00000569755 579 ntBASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHMP7Q8WUX9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHMP7Q8WUX9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 PGF-202ENST00000405431 666 ntTSL 5 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC28.08■■■□□ 2.09
CHMP7Q8WUX9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 MIR346-201ENST00000362234 95 ntBASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 AL096828.2-201ENST00000567259 1965 ntBASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHMP7Q8WUX9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 RPS2P32-201ENST00000439199 892 ntBASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms