Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 AC093677.2-201ENST00000600169 1863 ntBASIC24■■□□□ 1.43
PMFBP1Q8TBY8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PMFBP1Q8TBY8 BX276092.7-203ENST00000637198 1536 ntBASIC24■■□□□ 1.43
PMFBP1Q8TBY8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 AC105339.1-204ENST00000636249 355 ntBASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 AC092919.2-201ENST00000623631 1645 ntBASIC23.99■■□□□ 1.43
PMFBP1Q8TBY8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 AC135776.1-201ENST00000319817 2481 ntBASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PMFBP1Q8TBY8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 BCRP1-201ENST00000444246 691 ntBASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 CXCL1P1-201ENST00000502804 216 ntBASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 AC109322.1-201ENST00000524499 1264 ntBASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 AC009113.1-201ENST00000570267 2443 ntBASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 AC004835.2-201ENST00000603762 682 ntBASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
PMFBP1Q8TBY8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.96■■□□□ 1.43
PMFBP1Q8TBY8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms