Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 SNORA78-201ENST00000459373 127 ntBASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 WWOX-216ENST00000569818 525 ntBASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD2Q8NHY2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 AC010240.3-201ENST00000607688 395 ntBASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 REXO1L12P-201ENST00000622156 912 ntBASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD2Q8NHY2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 DDX43P3-201ENST00000441064 443 ntBASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 AP003041.3-201ENST00000527151 707 ntBASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 AP003071.4-201ENST00000562276 1284 ntBASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RFWD2Q8NHY2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms