Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC65Q8IXS2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 KRT8P10-201ENST00000450021 1447 ntBASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 AC016396.2-201ENST00000562575 1417 ntBASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC65Q8IXS2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.46■□□□□ 0.7
CCDC65Q8IXS2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 INTS4P1-201ENST00000438455 1935 ntBASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 RCN1P2-201ENST00000398357 915 ntBASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 AC099336.1-202ENST00000602961 463 ntBASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC65Q8IXS2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 AL353593.2-201ENST00000602529 1483 ntBASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 AC114341.1-201ENST00000618070 349 ntBASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 AC108860.2-201ENST00000562760 2183 ntBASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC65Q8IXS2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC65Q8IXS2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms