Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 MCCD1P2-201ENST00000423228 335 ntBASIC20.84■□□□□ 0.93
SLF2Q8IX21 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 SLC25A6P5-201ENST00000435663 894 ntBASIC20.84■□□□□ 0.93
SLF2Q8IX21 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.84■□□□□ 0.93
SLF2Q8IX21 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLF2Q8IX21 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.83■□□□□ 0.93
SLF2Q8IX21 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLF2Q8IX21 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.83■□□□□ 0.92
SLF2Q8IX21 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SLF2Q8IX21 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.83■□□□□ 0.92
SLF2Q8IX21 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.83■□□□□ 0.92
SLF2Q8IX21 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 AL135999.2-201ENST00000622438 1686 ntBASIC20.83■□□□□ 0.92
SLF2Q8IX21 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLF2Q8IX21 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 AL590787.1-201ENST00000568856 1315 ntBASIC20.82■□□□□ 0.92
SLF2Q8IX21 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 PI4KAP1-204ENST00000612579 1703 ntBASIC20.82■□□□□ 0.92
SLF2Q8IX21 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 AC055717.3-201ENST00000622967 595 ntBASIC20.82■□□□□ 0.92
SLF2Q8IX21 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SLF2Q8IX21 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLF2Q8IX21 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF2Q8IX21 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF2Q8IX21 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.81■□□□□ 0.92
SLF2Q8IX21 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF2Q8IX21 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLF2Q8IX21 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLF2Q8IX21 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.81■□□□□ 0.92
SLF2Q8IX21 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms