Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM42Q8IWZ5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM42Q8IWZ5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.52■□□□□ 0.39
TRIM42Q8IWZ5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 AC060834.1-201ENST00000443027 2032 ntBASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM42Q8IWZ5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 UNC93B2-201ENST00000285383 730 ntBASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 RBM17P1-201ENST00000453646 1190 ntBASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms