Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA4Q8IV77 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.06■□□□□ 0.64
CNGA4Q8IV77 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.06■□□□□ 0.64
CNGA4Q8IV77 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNGA4Q8IV77 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CNGA4Q8IV77 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 AC002558.1-201ENST00000488906 803 ntBASIC19.05■□□□□ 0.64
CNGA4Q8IV77 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNGA4Q8IV77 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 AL391807.1-203ENST00000604392 2365 ntBASIC19.04■□□□□ 0.64
CNGA4Q8IV77 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 KRT18P48-201ENST00000434763 852 ntBASIC19.04■□□□□ 0.64
CNGA4Q8IV77 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 SNORA78-201ENST00000459373 127 ntBASIC19.04■□□□□ 0.64
CNGA4Q8IV77 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 GCSHP2-201ENST00000560971 527 ntBASIC19.04■□□□□ 0.64
CNGA4Q8IV77 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 AL136038.4-201ENST00000603606 1261 ntBASIC19.04■□□□□ 0.64
CNGA4Q8IV77 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 AC093525.9-201ENST00000624961 1746 ntBASIC19.04■□□□□ 0.64
CNGA4Q8IV77 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.04■□□□□ 0.64
CNGA4Q8IV77 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 SLC25A1P3-201ENST00000395415 828 ntBASIC19.03■□□□□ 0.64
CNGA4Q8IV77 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CNGA4Q8IV77 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms