Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.77■□□□□ 0.28
RAB43Q86YS6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC008764.6-201ENST00000595909 2069 ntBASIC16.77■□□□□ 0.27
RAB43Q86YS6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 ESPNP-201ENST00000270691 2015 ntBASIC16.77■□□□□ 0.27
RAB43Q86YS6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB43Q86YS6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB43Q86YS6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.27
RAB43Q86YS6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB43Q86YS6 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.77■□□□□ 0.27
RAB43Q86YS6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 RPS2P28-201ENST00000314255 741 ntBASIC16.76■□□□□ 0.27
RAB43Q86YS6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 FGFR3P6-201ENST00000457012 610 ntBASIC16.76■□□□□ 0.27
RAB43Q86YS6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB43Q86YS6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB43Q86YS6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.75■□□□□ 0.27
RAB43Q86YS6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB43Q86YS6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms