Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 AL391005.1-201ENST00000623953 2435 ntBASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 TSPY20P-201ENST00000450910 630 ntBASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 AC024563.2-201ENST00000603282 481 ntBASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 CROCCP1-201ENST00000426910 5675 ntBASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM1Q86UE6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 AC092053.1-201ENST00000605787 1936 ntBASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TSPY7P-201ENST00000431358 1114 ntBASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 AC112698.1-201ENST00000510299 916 ntBASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 AC009154.2-201ENST00000621177 724 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms