Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SSR2-216ENST00000531790 476 ntTSL 56.91□□□□□ -1.35e-9■□□□□ 9.7
LARP4Q71RC2 APLP2-222ENST00000533860 1424 ntTSL 1 (best)15.12■□□□□ 0.013e-22■□□□□ 9.7
LARP4Q71RC2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.473e-8■□□□□ 9.7
LARP4Q71RC2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.553e-8■□□□□ 9.7
LARP4Q71RC2 DDAH2-217ENST00000469963 1682 ntTSL 518.38■□□□□ 0.533e-8■□□□□ 9.7
LARP4Q71RC2 DDAH2-218ENST00000480913 937 ntTSL 517.44■□□□□ 0.383e-8■□□□□ 9.7
LARP4Q71RC2 DDAH2-216ENST00000437288 724 ntTSL 511.45□□□□□ -0.583e-8■□□□□ 9.7
LARP4Q71RC2 DDAH2-219ENST00000483792 898 ntTSL 511.45□□□□□ -0.583e-8■□□□□ 9.7
LARP4Q71RC2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.229e-9■□□□□ 9.7
LARP4Q71RC2 HNRNPM-205ENST00000596295 910 ntTSL 316.47■□□□□ 0.235e-7■□□□□ 9.7
LARP4Q71RC2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.51■■□□□ 1.193e-9■□□□□ 9.6
LARP4Q71RC2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.5■■■□□ 2.317e-7■□□□□ 9.6
LARP4Q71RC2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.48■■□□□ 1.197e-7■□□□□ 9.6
LARP4Q71RC2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.157e-7■□□□□ 9.6
LARP4Q71RC2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.977e-7■□□□□ 9.6
LARP4Q71RC2 WBP1-211ENST00000484744 2047 ntTSL 220.79■□□□□ 0.927e-7■□□□□ 9.6
LARP4Q71RC2 INO80B-WBP1-201ENST00000441673 1668 ntAPPRIS ALT2 TSL 515.95■□□□□ 0.147e-7■□□□□ 9.6
LARP4Q71RC2 GSTP1-204ENST00000489040 523 ntTSL 213.1□□□□□ -0.313e-7■□□□□ 9.6
LARP4Q71RC2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.053e-12■□□□□ 9.6
LARP4Q71RC2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.133e-12■□□□□ 9.6
LARP4Q71RC2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.273e-12■□□□□ 9.6
LARP4Q71RC2 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.413e-12■□□□□ 9.6
LARP4Q71RC2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.62■□□□□ 0.254e-9■□□□□ 9.6
LARP4Q71RC2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.38■□□□□ 0.214e-9■□□□□ 9.6
LARP4Q71RC2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.2■□□□□ 0.184e-9■□□□□ 9.6
LARP4Q71RC2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.154e-9■□□□□ 9.6
LARP4Q71RC2 CYBA-206ENST00000566229 405 ntTSL 313.24□□□□□ -0.298e-9■□□□□ 9.6
LARP4Q71RC2 CYBA-207ENST00000566534 1006 ntTSL 513.24□□□□□ -0.298e-9■□□□□ 9.6
LARP4Q71RC2 CYBA-203ENST00000562209 624 ntTSL 517.6■□□□□ 0.411e-8■□□□□ 9.6
LARP4Q71RC2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.19■□□□□ 0.181e-8■□□□□ 9.6
LARP4Q71RC2 CYBA-204ENST00000563526 1052 ntTSL 214.19□□□□□ -0.141e-8■□□□□ 9.6
LARP4Q71RC2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.64□□□□□ -0.231e-8■□□□□ 9.6
LARP4Q71RC2 CYBA-209ENST00000568278 439 ntTSL 511.96□□□□□ -0.491e-8■□□□□ 9.6
LARP4Q71RC2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.78□□□□□ -0.042e-12■□□□□ 9.6
LARP4Q71RC2 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.422e-12■□□□□ 9.6
LARP4Q71RC2 ANXA4-209ENST00000477632 3949 ntTSL 1 (best)8.56□□□□□ -1.042e-12■□□□□ 9.6
LARP4Q71RC2 ANXA4-207ENST00000471395 4418 ntTSL 1 (best)4.52□□□□□ -1.692e-12■□□□□ 9.6
LARP4Q71RC2 MRPL52-217ENST00000557543 2020 ntTSL 218.39■□□□□ 0.538e-9■□□□□ 9.6
LARP4Q71RC2 MRPL52-207ENST00000553482 595 ntTSL 317.56■□□□□ 0.48e-9■□□□□ 9.6
LARP4Q71RC2 MRPL52-212ENST00000556214 579 ntTSL 216.38■□□□□ 0.218e-9■□□□□ 9.6
LARP4Q71RC2 MALAT1-202ENST00000534336 8708 ntBASIC8.88□□□□□ -0.991e-323■□□□□ 9.6
LARP4Q71RC2 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.39□□□□□ -1.391e-323■□□□□ 9.6
LARP4Q71RC2 SNF8-213ENST00000514929 775 ntTSL 522.37■■□□□ 1.174e-6■□□□□ 9.6
LARP4Q71RC2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.926e-8■□□□□ 9.6
LARP4Q71RC2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.911e-7■□□□□ 9.6
LARP4Q71RC2 BTBD2-206ENST00000589200 858 ntTSL 520.09■□□□□ 0.816e-8■□□□□ 9.6
LARP4Q71RC2 GIPC1-211ENST00000589631 799 ntTSL 318.42■□□□□ 0.546e-8■□□□□ 9.6
LARP4Q71RC2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.536e-8■□□□□ 9.6
LARP4Q71RC2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.536e-8■□□□□ 9.6
LARP4Q71RC2 DECR2-204ENST00000437024 1738 ntTSL 217.93■□□□□ 0.466e-8■□□□□ 9.6
LARP4Q71RC2 DYNC1H1-204ENST00000555062 1351 ntTSL 217.86■□□□□ 0.451e-10■□□□□ 9.6
LARP4Q71RC2 DECR2-207ENST00000461749 2062 ntTSL 217.49■□□□□ 0.396e-8■□□□□ 9.6
LARP4Q71RC2 ZNF581-202ENST00000585995 591 ntTSL 317.49■□□□□ 0.396e-8■□□□□ 9.6
LARP4Q71RC2 DECR2-205ENST00000439661 1618 ntTSL 217.48■□□□□ 0.396e-8■□□□□ 9.6
LARP4Q71RC2 PLXNB2-210ENST00000479818 1916 ntTSL 1 (best)16.99■□□□□ 0.316e-8■□□□□ 9.6
LARP4Q71RC2 CCDC106-208ENST00000592996 741 ntTSL 316.72■□□□□ 0.276e-8■□□□□ 9.6
LARP4Q71RC2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.226e-8■□□□□ 9.6
LARP4Q71RC2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.15■□□□□ 0.186e-8■□□□□ 9.6
LARP4Q71RC2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.78■□□□□ 0.126e-8■□□□□ 9.6
LARP4Q71RC2 NEU4-213ENST00000435934 451 ntTSL 415.35■□□□□ 0.054e-6■□□□□ 9.6
LARP4Q71RC2 SNF8-205ENST00000507302 742 ntTSL 314.73□□□□□ -0.054e-6■□□□□ 9.6
LARP4Q71RC2 DECR2-209ENST00000461947 1017 ntTSL 514.47□□□□□ -0.096e-8■□□□□ 9.6
LARP4Q71RC2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.16e-8■□□□□ 9.6
LARP4Q71RC2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.171e-7■□□□□ 9.6
LARP4Q71RC2 BTBD2-208ENST00000590646 572 ntTSL 413.57□□□□□ -0.246e-8■□□□□ 9.6
LARP4Q71RC2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.296e-8■□□□□ 9.6
LARP4Q71RC2 BTBD2-205ENST00000588395 352 ntTSL 513.14□□□□□ -0.316e-8■□□□□ 9.6
LARP4Q71RC2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.12□□□□□ -0.316e-8■□□□□ 9.6
LARP4Q71RC2 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.326e-8■□□□□ 9.6
LARP4Q71RC2 PLXNB2-209ENST00000479701 3504 ntTSL 213.01□□□□□ -0.336e-8■□□□□ 9.6
LARP4Q71RC2 PLXNB2-208ENST00000463165 3038 ntTSL 213□□□□□ -0.336e-8■□□□□ 9.6
LARP4Q71RC2 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.336e-8■□□□□ 9.6
LARP4Q71RC2 BTBD2-203ENST00000587742 559 ntTSL 512.95□□□□□ -0.346e-8■□□□□ 9.6
LARP4Q71RC2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.376e-8■□□□□ 9.6
LARP4Q71RC2 ANXA7-201ENST00000372919 2174 ntTSL 1 (best)12.15□□□□□ -0.466e-8■□□□□ 9.6
LARP4Q71RC2 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC11.06□□□□□ -0.646e-8■□□□□ 9.6
LARP4Q71RC2 ANXA7-202ENST00000372921 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.846e-8■□□□□ 9.6
LARP4Q71RC2 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC9.71□□□□□ -0.869e-11■□□□□ 9.6
LARP4Q71RC2 GSPT1-208ENST00000565267 1864 ntTSL 58.3□□□□□ -1.081e-7■□□□□ 9.6
LARP4Q71RC2 COX16-202ENST00000554366 447 ntTSL 38.23□□□□□ -1.096e-8■□□□□ 9.6
LARP4Q71RC2 ANXA7-204ENST00000463788 739 ntTSL 37.75□□□□□ -1.176e-8■□□□□ 9.6
LARP4Q71RC2 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.171e-7■□□□□ 9.6
LARP4Q71RC2 RPL24-205ENST00000488288 1857 ntTSL 210.49□□□□□ -0.733e-11■□□□□ 9.6
LARP4Q71RC2 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.51□□□□□ -1.059e-12■□□□□ 9.6
LARP4Q71RC2 AKR1C3-209ENST00000605149 1405 ntTSL 2 BASIC10.59□□□□□ -0.712e-12■□□□□ 9.6
LARP4Q71RC2 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.982e-12■□□□□ 9.6
LARP4Q71RC2 AKR1C3-208ENST00000603484 629 ntTSL 26.41□□□□□ -1.382e-12■□□□□ 9.6
LARP4Q71RC2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.88■□□□□ 0.131e-26■□□□□ 9.6
LARP4Q71RC2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.81■□□□□ 0.763e-6■□□□□ 9.6
LARP4Q71RC2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.81■□□□□ 0.63e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.553e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.533e-6■□□□□ 9.6
LARP4Q71RC2 ARF3-204ENST00000485410 563 ntTSL 317.62■□□□□ 0.413e-6■□□□□ 9.6
LARP4Q71RC2 FTCD-205ENST00000446405 436 ntTSL 317.39■□□□□ 0.373e-10■□□□□ 9.6
LARP4Q71RC2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.85■□□□□ 0.293e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.273e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.28■□□□□ 0.23e-10■□□□□ 9.6
LARP4Q71RC2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.183e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.05■□□□□ 0.163e-6■□□□□ 9.6
LARP4Q71RC2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.033e-6■□□□□ 9.6
Retrieved 100 of 15,922 protein–RNA pairs in 328.2 ms