Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AC096582.2-201ENST00000510860 516 ntBASIC16.46■□□□□ 0.23
RTL4Q6ZR62 RN7SL510P-201ENST00000581311 263 ntBASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AC005336.2-201ENST00000593183 939 ntBASIC16.46■□□□□ 0.23
RTL4Q6ZR62 BNIP3P18-201ENST00000593976 575 ntBASIC16.46■□□□□ 0.23
RTL4Q6ZR62 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AL121894.2-201ENST00000602977 491 ntBASIC16.46■□□□□ 0.23
RTL4Q6ZR62 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AC009053.2-201ENST00000563701 2365 ntBASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RTL4Q6ZR62 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.46■□□□□ 0.22
RTL4Q6ZR62 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 UNC93B7-201ENST00000509439 705 ntBASIC16.45■□□□□ 0.22
RTL4Q6ZR62 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 AC009533.2-201ENST00000543664 586 ntBASIC16.45■□□□□ 0.22
RTL4Q6ZR62 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL4Q6ZR62 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 FAAHP1-202ENST00000446499 1238 ntBASIC16.44■□□□□ 0.22
RTL4Q6ZR62 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 DUTP2-201ENST00000519164 463 ntBASIC16.44■□□□□ 0.22
RTL4Q6ZR62 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.44■□□□□ 0.22
RTL4Q6ZR62 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms