Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 STK25P1-201ENST00000585406 838 ntBASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 AC006557.2-201ENST00000592985 1240 ntBASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
H3F3CQ6NXT2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AC073621.1-201ENST00000392730 636 ntBASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AC005104.2-201ENST00000427818 678 ntBASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 IGHV3-52-201ENST00000519770 353 ntBASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.19■□□□□ 0.18
H3F3CQ6NXT2 BICD1-207ENST00000551848 1962 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AC012313.1-201ENST00000593393 3059 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AP002414.3-201ENST00000589352 1468 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 RNA5SP415-201ENST00000517246 115 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AC034105.1-201ENST00000563488 319 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AC023511.2-201ENST00000618803 211 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 PGM5P2-202ENST00000637225 1043 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AC148477.5-201ENST00000625164 1645 ntBASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3CQ6NXT2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms