Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 AC009093.7-201ENST00000623853 1223 ntBASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 CROCCP3-202ENST00000420820 1947 ntBASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD4Q5XG99 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD4Q5XG99 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD4Q5XG99 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD4Q5XG99 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.33
LYSMD4Q5XG99 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
LYSMD4Q5XG99 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LYSMD4Q5XG99 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 ADH5P3-201ENST00000433842 1137 ntBASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 RNA5SP421-201ENST00000516864 134 ntBASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 FAM86C2P-203ENST00000528684 1004 ntBASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 AC026120.1-201ENST00000611536 926 ntBASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD4Q5XG99 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AL355306.1-201ENST00000415580 579 ntBASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AC005237.2-201ENST00000434368 219 ntBASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AC138761.1-201ENST00000584393 385 ntBASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AC015911.4-201ENST00000588022 1070 ntBASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD4Q5XG99 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD4Q5XG99 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms