Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AC009949.1-201ENST00000623048 1830 ntBASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.43■□□□□ 0.38
SH2D4BQ5SQS7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 AC068418.2-201ENST00000577309 3703 ntBASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 MMP23A-201ENST00000234610 1017 ntBASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 MIR3917-201ENST00000580971 93 ntBASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 AC116407.2-201ENST00000613639 860 ntBASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SH2D4BQ5SQS7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 KRT8P9-201ENST00000558927 1449 ntBASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
SH2D4BQ5SQS7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms