Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 POM121L13P-201ENST00000422362 380 ntBASIC13.82□□□□□ -0.2
CCL20P78556 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.82□□□□□ -0.2
CCL20P78556 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL20P78556 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.82□□□□□ -0.2
CCL20P78556 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL20P78556 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL20P78556 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCL20P78556 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL20P78556 AC004951.3-201ENST00000418645 1148 ntBASIC13.81□□□□□ -0.2
CCL20P78556 AC008040.2-201ENST00000461049 708 ntBASIC13.81□□□□□ -0.2
CCL20P78556 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL20P78556 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL20P78556 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.81□□□□□ -0.2
CCL20P78556 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL20P78556 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
CCL20P78556 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL20P78556 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL20P78556 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL20P78556 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL20P78556 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL20P78556 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL20P78556 UNC93B4-201ENST00000505679 747 ntBASIC13.8□□□□□ -0.2
CCL20P78556 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms