Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
IRX4P78413 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.27■□□□□ 0.52
IRX4P78413 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.27■□□□□ 0.51
IRX4P78413 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.27■□□□□ 0.51
IRX4P78413 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
IRX4P78413 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.27■□□□□ 0.51
IRX4P78413 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
IRX4P78413 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.27■□□□□ 0.51
IRX4P78413 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
IRX4P78413 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
IRX4P78413 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.26■□□□□ 0.51
IRX4P78413 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
IRX4P78413 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 VENTXP7-201ENST00000475503 772 ntBASIC18.26■□□□□ 0.51
IRX4P78413 AC091607.1-201ENST00000490318 1060 ntBASIC18.26■□□□□ 0.51
IRX4P78413 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.26■□□□□ 0.51
IRX4P78413 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.26■□□□□ 0.51
IRX4P78413 AC092865.5-201ENST00000545435 363 ntBASIC18.26■□□□□ 0.51
IRX4P78413 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IRX4P78413 AC012317.2-201ENST00000623305 2251 ntBASIC18.26■□□□□ 0.51
IRX4P78413 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX4P78413 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
IRX4P78413 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX4P78413 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX4P78413 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX4P78413 KRT18P58-201ENST00000527480 1120 ntBASIC18.25■□□□□ 0.51
IRX4P78413 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.25■□□□□ 0.51
IRX4P78413 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.25■□□□□ 0.51
IRX4P78413 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.25■□□□□ 0.51
IRX4P78413 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
IRX4P78413 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX4P78413 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX4P78413 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
IRX4P78413 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
IRX4P78413 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
IRX4P78413 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
IRX4P78413 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 AL031284.1-201ENST00000419297 478 ntBASIC18.24■□□□□ 0.51
IRX4P78413 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX4P78413 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 MINOS1P3-201ENST00000457048 203 ntBASIC18.24■□□□□ 0.51
IRX4P78413 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.24■□□□□ 0.51
IRX4P78413 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX4P78413 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.24■□□□□ 0.51
IRX4P78413 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.24■□□□□ 0.51
IRX4P78413 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.24■□□□□ 0.51
IRX4P78413 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX4P78413 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX4P78413 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms