Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H6P61129 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H6P61129 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H6P61129 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ZC3H6P61129 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 UGT1A2P-201ENST00000454886 866 ntBASIC23.23■■□□□ 1.31
ZC3H6P61129 AC087163.2-201ENST00000457299 853 ntBASIC23.23■■□□□ 1.31
ZC3H6P61129 HLA-J-202ENST00000469281 1241 ntBASIC23.23■■□□□ 1.31
ZC3H6P61129 AC069335.1-201ENST00000489972 472 ntBASIC23.23■■□□□ 1.31
ZC3H6P61129 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.23■■□□□ 1.31
ZC3H6P61129 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC23.23■■□□□ 1.31
ZC3H6P61129 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.23■■□□□ 1.31
ZC3H6P61129 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H6P61129 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H6P61129 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H6P61129 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.23■■□□□ 1.31
ZC3H6P61129 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H6P61129 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 AL135999.2-201ENST00000622438 1686 ntBASIC23.22■■□□□ 1.31
ZC3H6P61129 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 AC002472.2-201ENST00000442739 958 ntBASIC23.22■■□□□ 1.31
ZC3H6P61129 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H6P61129 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3H6P61129 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3H6P61129 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H6P61129 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H6P61129 RN7SL204P-201ENST00000582831 262 ntBASIC23.22■■□□□ 1.31
ZC3H6P61129 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3H6P61129 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H6P61129 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3H6P61129 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3H6P61129 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
ZC3H6P61129 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H6P61129 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.21■■□□□ 1.31
ZC3H6P61129 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ZC3H6P61129 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 MIR943-201ENST00000401286 94 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 CENPM-205ENST00000404067 905 ntTSL 3 BASIC23.21■■□□□ 1.31
ZC3H6P61129 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.21■■□□□ 1.31
ZC3H6P61129 AC140658.5-201ENST00000438532 169 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 CNN2P2-201ENST00000443536 909 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 CNN2P3-201ENST00000450201 906 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 FAM86C2P-203ENST00000528684 1004 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.21■■□□□ 1.31
ZC3H6P61129 AC243562.1-201ENST00000560672 389 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 AL136317.3-201ENST00000618497 906 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC23.21■■□□□ 1.31
ZC3H6P61129 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ZC3H6P61129 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.21■■□□□ 1.31
ZC3H6P61129 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 REXO1L9P-201ENST00000604264 2108 ntBASIC23.21■■□□□ 1.31
ZC3H6P61129 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.21■■□□□ 1.31
ZC3H6P61129 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H6P61129 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC23.2■■□□□ 1.3
ZC3H6P61129 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ZC3H6P61129 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H6P61129 TUBB3P1-201ENST00000405796 1332 ntBASIC23.2■■□□□ 1.3
ZC3H6P61129 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 TFAMP1-201ENST00000412727 736 ntBASIC23.2■■□□□ 1.3
ZC3H6P61129 KRT18P32-201ENST00000424695 1287 ntBASIC23.2■■□□□ 1.3
ZC3H6P61129 TSPY16P-201ENST00000449843 468 ntBASIC23.2■■□□□ 1.3
ZC3H6P61129 OARD1-208ENST00000469104 704 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H6P61129 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC23.2■■□□□ 1.3
ZC3H6P61129 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC23.2■■□□□ 1.3
ZC3H6P61129 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC23.2■■□□□ 1.3
ZC3H6P61129 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H6P61129 POLD4-211ENST00000539074 714 ntTSL 3 BASIC23.2■■□□□ 1.3
ZC3H6P61129 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.2■■□□□ 1.3
ZC3H6P61129 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ZC3H6P61129 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC23.2■■□□□ 1.3
ZC3H6P61129 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H6P61129 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms