Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP4BP1P59074 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CHMP4BP1P59074 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 SART3-203ENST00000546611 1184 ntBASIC20.04■□□□□ 0.8
CHMP4BP1P59074 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 AC139530.3-201ENST00000620344 690 ntBASIC20.04■□□□□ 0.8
CHMP4BP1P59074 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHMP4BP1P59074 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 RPS2P28-201ENST00000314255 741 ntBASIC20.03■□□□□ 0.8
CHMP4BP1P59074 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 AC112698.1-201ENST00000510299 916 ntBASIC20.03■□□□□ 0.8
CHMP4BP1P59074 AC106730.1-201ENST00000566722 1090 ntBASIC20.03■□□□□ 0.8
CHMP4BP1P59074 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 AC117500.6-201ENST00000624871 588 ntBASIC20.03■□□□□ 0.8
CHMP4BP1P59074 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP4BP1P59074 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 AP005117.1-201ENST00000584346 1413 ntBASIC20.02■□□□□ 0.8
CHMP4BP1P59074 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 KRT18P65-201ENST00000439811 1286 ntBASIC20.02■□□□□ 0.8
CHMP4BP1P59074 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 AC021087.4-201ENST00000563761 564 ntBASIC20.02■□□□□ 0.8
CHMP4BP1P59074 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 AC011467.2-201ENST00000598425 242 ntBASIC20.02■□□□□ 0.8
CHMP4BP1P59074 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 ZNF259P1-201ENST00000407656 1365 ntBASIC20.02■□□□□ 0.8
CHMP4BP1P59074 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP4BP1P59074 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.02■□□□□ 0.79
CHMP4BP1P59074 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP4BP1P59074 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP4BP1P59074 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP4BP1P59074 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms