Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.27■□□□□ 0.04
CLDN12P56749 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN12P56749 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN12P56749 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN12P56749 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN12P56749 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN12P56749 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN12P56749 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN12P56749 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.27■□□□□ 0.04
CLDN12P56749 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN12P56749 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN12P56749 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CLDN12P56749 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN12P56749 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN12P56749 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN12P56749 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN12P56749 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 AC092171.3-201ENST00000610122 2651 ntBASIC15.26■□□□□ 0.03
CLDN12P56749 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 RPS2P55-201ENST00000397318 883 ntBASIC15.26■□□□□ 0.03
CLDN12P56749 CCR12P-201ENST00000446203 998 ntBASIC15.26■□□□□ 0.03
CLDN12P56749 AC107956.1-201ENST00000494359 873 ntBASIC15.26■□□□□ 0.03
CLDN12P56749 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.26■□□□□ 0.03
CLDN12P56749 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN12P56749 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN12P56749 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN12P56749 AC016396.2-201ENST00000562575 1417 ntBASIC15.26■□□□□ 0.03
CLDN12P56749 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 AC116353.5-201ENST00000638148 1699 ntBASIC15.25■□□□□ 0.03
CLDN12P56749 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN12P56749 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN12P56749 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN12P56749 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms