Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKN2DP55273 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKN2DP55273 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 AL590326.2-201ENST00000625139 305 ntBASIC17.31■□□□□ 0.36
CDKN2DP55273 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDKN2DP55273 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2DP55273 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2DP55273 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDKN2DP55273 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKN2DP55273 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 KRT18P1-202ENST00000452408 1331 ntBASIC17.3■□□□□ 0.36
CDKN2DP55273 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKN2DP55273 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.3■□□□□ 0.36
CDKN2DP55273 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKN2DP55273 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKN2DP55273 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKN2DP55273 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
CDKN2DP55273 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKN2DP55273 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKN2DP55273 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKN2DP55273 AC060834.1-201ENST00000443027 2032 ntBASIC17.3■□□□□ 0.36
CDKN2DP55273 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKN2DP55273 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDKN2DP55273 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2DP55273 IER3-202ENST00000376377 1350 ntBASIC17.29■□□□□ 0.36
CDKN2DP55273 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2DP55273 AC233702.3-201ENST00000578656 1387 ntBASIC17.29■□□□□ 0.36
CDKN2DP55273 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDKN2DP55273 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 MYCLP1-201ENST00000372451 1075 ntBASIC17.29■□□□□ 0.36
CDKN2DP55273 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.29■□□□□ 0.36
CDKN2DP55273 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.29■□□□□ 0.36
CDKN2DP55273 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.29■□□□□ 0.36
CDKN2DP55273 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.29■□□□□ 0.36
CDKN2DP55273 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKN2DP55273 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDKN2DP55273 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKN2DP55273 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2DP55273 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2DP55273 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKN2DP55273 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 AC046185.3-201ENST00000623228 1824 ntBASIC17.28■□□□□ 0.36
CDKN2DP55273 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKN2DP55273 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2DP55273 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKN2DP55273 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms