Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 KRT8P32-201ENST00000512863 1461 ntBASIC16.67■□□□□ 0.26
NR1H2P55055 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H2P55055 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H2P55055 AC104076.2-201ENST00000448912 469 ntBASIC16.67■□□□□ 0.26
NR1H2P55055 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.67■□□□□ 0.26
NR1H2P55055 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
NR1H2P55055 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.67■□□□□ 0.26
NR1H2P55055 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NR1H2P55055 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
NR1H2P55055 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
NR1H2P55055 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H2P55055 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NR1H2P55055 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.66■□□□□ 0.26
NR1H2P55055 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NR1H2P55055 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.66■□□□□ 0.26
NR1H2P55055 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NR1H2P55055 AK4P3-201ENST00000418260 669 ntBASIC16.66■□□□□ 0.26
NR1H2P55055 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.66■□□□□ 0.26
NR1H2P55055 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.66■□□□□ 0.26
NR1H2P55055 AC087388.1-201ENST00000571370 1112 ntBASIC16.66■□□□□ 0.26
NR1H2P55055 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NR1H2P55055 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.66■□□□□ 0.26
NR1H2P55055 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
NR1H2P55055 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
NR1H2P55055 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.66■□□□□ 0.26
NR1H2P55055 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NR1H2P55055 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H2P55055 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 AC092338.2-201ENST00000568827 1415 ntBASIC16.65■□□□□ 0.26
NR1H2P55055 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
NR1H2P55055 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.65■□□□□ 0.26
NR1H2P55055 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.65■□□□□ 0.26
NR1H2P55055 AC007663.1-201ENST00000438948 1240 ntBASIC16.65■□□□□ 0.26
NR1H2P55055 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.65■□□□□ 0.26
NR1H2P55055 AC006011.2-201ENST00000621313 1158 ntBASIC16.65■□□□□ 0.26
NR1H2P55055 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms