Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PDX1P52945 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PDX1P52945 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.02■□□□□ 0.32
PDX1P52945 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PDX1P52945 AC073621.1-201ENST00000392730 636 ntBASIC17.02■□□□□ 0.32
PDX1P52945 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.02■□□□□ 0.32
PDX1P52945 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.02■□□□□ 0.32
PDX1P52945 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDX1P52945 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PDX1P52945 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDX1P52945 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PDX1P52945 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PDX1P52945 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDX1P52945 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDX1P52945 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
PDX1P52945 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDX1P52945 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PDX1P52945 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.01■□□□□ 0.31
PDX1P52945 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 AC112482.1-201ENST00000492080 688 ntBASIC17.01■□□□□ 0.31
PDX1P52945 AC122714.2-201ENST00000502787 707 ntBASIC17.01■□□□□ 0.31
PDX1P52945 RNA5SP416-201ENST00000516838 111 ntBASIC17.01■□□□□ 0.31
PDX1P52945 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 AP001160.2-201ENST00000596071 487 ntBASIC17.01■□□□□ 0.31
PDX1P52945 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 AC068880.1-201ENST00000507289 2297 ntBASIC17.01■□□□□ 0.31
PDX1P52945 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDX1P52945 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.01■□□□□ 0.31
PDX1P52945 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PDX1P52945 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 AC005332.8-201ENST00000622750 2735 ntBASIC17■□□□□ 0.31
PDX1P52945 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 PHGDH-209ENST00000641074 1780 ntBASIC17■□□□□ 0.31
PDX1P52945 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17■□□□□ 0.31
PDX1P52945 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17■□□□□ 0.31
PDX1P52945 SPDYE21P-201ENST00000413323 827 ntBASIC17■□□□□ 0.31
PDX1P52945 AC004832.2-201ENST00000426397 482 ntBASIC17■□□□□ 0.31
PDX1P52945 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17■□□□□ 0.31
PDX1P52945 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17■□□□□ 0.31
PDX1P52945 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17■□□□□ 0.31
PDX1P52945 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17■□□□□ 0.31
PDX1P52945 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17■□□□□ 0.31
PDX1P52945 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17■□□□□ 0.31
PDX1P52945 SIGLEC16-201ENST00000599858 1437 ntBASIC17■□□□□ 0.31
PDX1P52945 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17■□□□□ 0.31
PDX1P52945 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PDX1P52945 AL096828.2-201ENST00000567259 1965 ntBASIC17■□□□□ 0.31
PDX1P52945 AR-207ENST00000612010 3896 ntTSL 5 BASIC17■□□□□ 0.31
PDX1P52945 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17■□□□□ 0.31
PDX1P52945 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDX1P52945 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDX1P52945 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.99■□□□□ 0.31
PDX1P52945 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.99■□□□□ 0.31
PDX1P52945 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDX1P52945 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDX1P52945 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDX1P52945 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms