Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PSEN1P49768 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 RCN1P2-201ENST00000398357 915 ntBASIC18.65■□□□□ 0.58
PSEN1P49768 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.65■□□□□ 0.58
PSEN1P49768 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 REXO1L9P-201ENST00000604264 2108 ntBASIC18.65■□□□□ 0.58
PSEN1P49768 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 KRT8P47-201ENST00000604727 1398 ntBASIC18.65■□□□□ 0.58
PSEN1P49768 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSEN1P49768 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.65■□□□□ 0.58
PSEN1P49768 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PSEN1P49768 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSEN1P49768 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PSEN1P49768 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PSEN1P49768 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PSEN1P49768 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PSEN1P49768 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.64■□□□□ 0.57
PSEN1P49768 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 FAM220CP-201ENST00000395253 831 ntBASIC18.64■□□□□ 0.57
PSEN1P49768 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.64■□□□□ 0.57
PSEN1P49768 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.64■□□□□ 0.57
PSEN1P49768 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC18.64■□□□□ 0.57
PSEN1P49768 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.64■□□□□ 0.57
PSEN1P49768 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.64■□□□□ 0.57
PSEN1P49768 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.64■□□□□ 0.57
PSEN1P49768 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PSEN1P49768 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PSEN1P49768 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSEN1P49768 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PSEN1P49768 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.63■□□□□ 0.57
PSEN1P49768 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PSEN1P49768 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC18.63■□□□□ 0.57
PSEN1P49768 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PSEN1P49768 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.63■□□□□ 0.57
PSEN1P49768 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.63■□□□□ 0.57
PSEN1P49768 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.63■□□□□ 0.57
PSEN1P49768 REXO1L6P-202ENST00000619970 1078 ntBASIC18.63■□□□□ 0.57
PSEN1P49768 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.63■□□□□ 0.57
PSEN1P49768 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.63■□□□□ 0.57
PSEN1P49768 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC067852.2-201ENST00000590513 2313 ntBASIC18.63■□□□□ 0.57
PSEN1P49768 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PSEN1P49768 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.63■□□□□ 0.57
PSEN1P49768 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSEN1P49768 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms