Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.75■□□□□ 0.91
TNNI2P48788 AC007064.4-201ENST00000637740 555 ntBASIC20.75■□□□□ 0.91
TNNI2P48788 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNNI2P48788 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TNNI2P48788 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.75■□□□□ 0.91
TNNI2P48788 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNNI2P48788 AC135776.1-201ENST00000319817 2481 ntBASIC20.75■□□□□ 0.91
TNNI2P48788 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.74■□□□□ 0.91
TNNI2P48788 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 RHOQP3-201ENST00000437982 621 ntBASIC20.74■□□□□ 0.91
TNNI2P48788 ACTG1P14-201ENST00000446382 1122 ntBASIC20.74■□□□□ 0.91
TNNI2P48788 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TNNI2P48788 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.74■□□□□ 0.91
TNNI2P48788 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TNNI2P48788 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.74■□□□□ 0.91
TNNI2P48788 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.74■□□□□ 0.91
TNNI2P48788 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNNI2P48788 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNNI2P48788 AC100803.2-201ENST00000562459 1963 ntBASIC20.74■□□□□ 0.91
TNNI2P48788 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TNNI2P48788 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI2P48788 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TNNI2P48788 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 AL645939.2-201ENST00000427340 991 ntBASIC20.73■□□□□ 0.91
TNNI2P48788 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.73■□□□□ 0.91
TNNI2P48788 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.73■□□□□ 0.91
TNNI2P48788 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI2P48788 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI2P48788 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.73■□□□□ 0.91
TNNI2P48788 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNNI2P48788 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.73■□□□□ 0.91
TNNI2P48788 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.72■□□□□ 0.91
TNNI2P48788 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
TNNI2P48788 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.72■□□□□ 0.91
TNNI2P48788 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNNI2P48788 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.72■□□□□ 0.91
TNNI2P48788 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.72■□□□□ 0.91
TNNI2P48788 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.72■□□□□ 0.91
TNNI2P48788 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TNNI2P48788 AC074386.1-202ENST00000463561 864 ntBASIC20.72■□□□□ 0.91
TNNI2P48788 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
TNNI2P48788 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.72■□□□□ 0.91
TNNI2P48788 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms