Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF9P41273 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TNFSF9P41273 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF9P41273 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFSF9P41273 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
TNFSF9P41273 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFSF9P41273 AC005332.8-201ENST00000622750 2735 ntBASIC18.94■□□□□ 0.62
TNFSF9P41273 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFSF9P41273 AC243591.1-201ENST00000452967 1364 ntBASIC18.93■□□□□ 0.62
TNFSF9P41273 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TNFSF9P41273 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TNFSF9P41273 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TNFSF9P41273 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TNFSF9P41273 FZD10-202ENST00000539839 3282 ntBASIC18.93■□□□□ 0.62
TNFSF9P41273 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFSF9P41273 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFSF9P41273 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF9P41273 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF9P41273 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.92■□□□□ 0.62
TNFSF9P41273 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF9P41273 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.92■□□□□ 0.62
TNFSF9P41273 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.92■□□□□ 0.62
TNFSF9P41273 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF9P41273 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.92■□□□□ 0.62
TNFSF9P41273 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.92■□□□□ 0.62
TNFSF9P41273 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
TNFSF9P41273 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFSF9P41273 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF9P41273 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFSF9P41273 LINC00896-202ENST00000609602 2128 ntBASIC18.92■□□□□ 0.62
TNFSF9P41273 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFSF9P41273 AL135999.2-201ENST00000622438 1686 ntBASIC18.92■□□□□ 0.62
TNFSF9P41273 AC097637.2-201ENST00000624096 1997 ntBASIC18.92■□□□□ 0.62
TNFSF9P41273 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TNFSF9P41273 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF9P41273 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFSF9P41273 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.91■□□□□ 0.62
TNFSF9P41273 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFSF9P41273 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TNFSF9P41273 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFSF9P41273 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms