Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.2■□□□□ 0.66
KRT9P35527 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.2■□□□□ 0.66
KRT9P35527 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT9P35527 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT9P35527 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT9P35527 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
KRT9P35527 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT9P35527 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT9P35527 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT9P35527 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 AC016396.2-201ENST00000562575 1417 ntBASIC19.19■□□□□ 0.66
KRT9P35527 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
KRT9P35527 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT9P35527 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT9P35527 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT9P35527 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 AP003733.1-201ENST00000491725 852 ntBASIC19.19■□□□□ 0.66
KRT9P35527 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.19■□□□□ 0.66
KRT9P35527 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT9P35527 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.19■□□□□ 0.66
KRT9P35527 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT9P35527 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
KRT9P35527 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT9P35527 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT9P35527 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT9P35527 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 MIR662-201ENST00000384847 95 ntBASIC19.18■□□□□ 0.66
KRT9P35527 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT9P35527 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT9P35527 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT9P35527 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT9P35527 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT9P35527 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT9P35527 HYMAI.1-201ENST00000620949 238 ntBASIC19.18■□□□□ 0.66
KRT9P35527 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT9P35527 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT9P35527 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT9P35527 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
KRT9P35527 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KRT9P35527 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
KRT9P35527 AGGF1P2-201ENST00000426656 2106 ntBASIC19.18■□□□□ 0.66
KRT9P35527 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
KRT9P35527 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT9P35527 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KRT9P35527 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT9P35527 AC060834.1-201ENST00000443027 2032 ntBASIC19.17■□□□□ 0.66
KRT9P35527 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT9P35527 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
KRT9P35527 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT9P35527 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KRT9P35527 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT9P35527 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT9P35527 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms