Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCK1P16333 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.6■□□□□ 0.25
NCK1P16333 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 PRORSD1P-201ENST00000295112 541 ntBASIC16.59■□□□□ 0.25
NCK1P16333 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.59■□□□□ 0.25
NCK1P16333 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.59■□□□□ 0.25
NCK1P16333 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.59■□□□□ 0.25
NCK1P16333 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 AL157888.1-201ENST00000631930 593 ntBASIC16.59■□□□□ 0.25
NCK1P16333 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
NCK1P16333 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCK1P16333 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NCK1P16333 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCK1P16333 FER1L4-210ENST00000615531 5998 ntBASIC16.58■□□□□ 0.25
NCK1P16333 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.58■□□□□ 0.25
NCK1P16333 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NCK1P16333 RNF216P1-203ENST00000404404 2427 ntBASIC16.58■□□□□ 0.25
NCK1P16333 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NCK1P16333 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCK1P16333 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCK1P16333 AC092171.3-201ENST00000610122 2651 ntBASIC16.58■□□□□ 0.25
NCK1P16333 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NCK1P16333 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCK1P16333 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 PVRIG2P-201ENST00000435460 978 ntBASIC16.58■□□□□ 0.24
NCK1P16333 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.58■□□□□ 0.24
NCK1P16333 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.58■□□□□ 0.24
NCK1P16333 AC098590.1-201ENST00000468126 897 ntBASIC16.58■□□□□ 0.24
NCK1P16333 FITM1-202ENST00000559294 800 ntBASIC16.58■□□□□ 0.24
NCK1P16333 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.58■□□□□ 0.24
NCK1P16333 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.58■□□□□ 0.24
NCK1P16333 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
NCK1P16333 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 AL603756.1-201ENST00000606511 2163 ntBASIC16.58■□□□□ 0.24
NCK1P16333 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCK1P16333 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.58■□□□□ 0.24
NCK1P16333 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.58■□□□□ 0.24
NCK1P16333 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 AC092053.1-201ENST00000605787 1936 ntBASIC16.57■□□□□ 0.24
NCK1P16333 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms