Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
CCL4P13236 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.46■□□□□ 0.23
CCL4P13236 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCL4P13236 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCL4P13236 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL4P13236 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.46■□□□□ 0.23
CCL4P13236 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL4P13236 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CCL4P13236 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.46■□□□□ 0.22
CCL4P13236 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCL4P13236 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CCL4P13236 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 FLJ13224-201ENST00000313737 1514 ntBASIC16.45■□□□□ 0.22
CCL4P13236 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CCL4P13236 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
CCL4P13236 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.45■□□□□ 0.22
CCL4P13236 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.45■□□□□ 0.22
CCL4P13236 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL4P13236 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.45■□□□□ 0.22
CCL4P13236 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.45■□□□□ 0.22
CCL4P13236 AC027612.4-201ENST00000605371 583 ntBASIC16.45■□□□□ 0.22
CCL4P13236 AC091812.2-201ENST00000619081 385 ntBASIC16.45■□□□□ 0.22
CCL4P13236 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCL4P13236 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL4P13236 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCL4P13236 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCL4P13236 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 AL135999.2-201ENST00000622438 1686 ntBASIC16.44■□□□□ 0.22
CCL4P13236 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 AL645939.2-201ENST00000427340 991 ntBASIC16.44■□□□□ 0.22
CCL4P13236 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 REXO1L11P-201ENST00000620964 1927 ntBASIC16.44■□□□□ 0.22
CCL4P13236 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL4P13236 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL4P13236 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL4P13236 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.43■□□□□ 0.22
CCL4P13236 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CCL4P13236 AC046185.3-201ENST00000623228 1824 ntBASIC16.43■□□□□ 0.22
CCL4P13236 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCL4P13236 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms