Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
DEFA4P12838 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
DEFA4P12838 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.3□□□□□ -0.12
DEFA4P12838 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.3□□□□□ -0.12
DEFA4P12838 AC005363.2-201ENST00000618631 242 ntBASIC14.3□□□□□ -0.12
DEFA4P12838 AC073912.3-201ENST00000624414 853 ntBASIC14.3□□□□□ -0.12
DEFA4P12838 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.3□□□□□ -0.12
DEFA4P12838 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.3□□□□□ -0.12
DEFA4P12838 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.3□□□□□ -0.12
DEFA4P12838 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
DEFA4P12838 AC093010.1-201ENST00000473625 1624 ntBASIC14.3□□□□□ -0.12
DEFA4P12838 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DEFA4P12838 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DEFA4P12838 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.29□□□□□ -0.12
DEFA4P12838 AL137013.1-201ENST00000432946 1228 ntBASIC14.29□□□□□ -0.12
DEFA4P12838 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 AL157888.1-201ENST00000631930 593 ntBASIC14.29□□□□□ -0.12
DEFA4P12838 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
DEFA4P12838 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DEFA4P12838 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DEFA4P12838 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DEFA4P12838 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DEFA4P12838 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
DEFA4P12838 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 PVRIG2P-201ENST00000435460 978 ntBASIC14.28□□□□□ -0.12
DEFA4P12838 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.28□□□□□ -0.12
DEFA4P12838 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.28□□□□□ -0.12
DEFA4P12838 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DEFA4P12838 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.28□□□□□ -0.12
DEFA4P12838 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
DEFA4P12838 AC022898.2-201ENST00000616822 1312 ntBASIC14.28□□□□□ -0.12
DEFA4P12838 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
DEFA4P12838 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
DEFA4P12838 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DEFA4P12838 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.28□□□□□ -0.12
DEFA4P12838 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
DEFA4P12838 PCDH8P1-201ENST00000428983 2773 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms