Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RARBP10826 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARBP10826 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
RARBP10826 PI4KAP1-204ENST00000612579 1703 ntBASIC19.56■□□□□ 0.72
RARBP10826 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RARBP10826 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARBP10826 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARBP10826 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.56■□□□□ 0.72
RARBP10826 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RARBP10826 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARBP10826 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RARBP10826 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RARBP10826 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RARBP10826 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RARBP10826 AL139400.1-201ENST00000366220 510 ntBASIC19.55■□□□□ 0.72
RARBP10826 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.55■□□□□ 0.72
RARBP10826 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARBP10826 DDX43P3-201ENST00000441064 443 ntBASIC19.55■□□□□ 0.72
RARBP10826 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.55■□□□□ 0.72
RARBP10826 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.55■□□□□ 0.72
RARBP10826 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.55■□□□□ 0.72
RARBP10826 SPCS2P1-201ENST00000561636 679 ntBASIC19.55■□□□□ 0.72
RARBP10826 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.55■□□□□ 0.72
RARBP10826 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RARBP10826 AL513210.1-201ENST00000629608 234 ntBASIC19.55■□□□□ 0.72
RARBP10826 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.55■□□□□ 0.72
RARBP10826 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.55■□□□□ 0.72
RARBP10826 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RARBP10826 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.55■□□□□ 0.72
RARBP10826 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.55■□□□□ 0.72
RARBP10826 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RARBP10826 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RARBP10826 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RARBP10826 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
RARBP10826 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.54■□□□□ 0.72
RARBP10826 CXCL1P1-201ENST00000502804 216 ntBASIC19.54■□□□□ 0.72
RARBP10826 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.54■□□□□ 0.72
RARBP10826 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
RARBP10826 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.54■□□□□ 0.72
RARBP10826 AC092902.6-201ENST00000641783 218 ntBASIC19.54■□□□□ 0.72
RARBP10826 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.54■□□□□ 0.72
RARBP10826 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARBP10826 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 AC009949.1-201ENST00000623048 1830 ntBASIC19.53■□□□□ 0.72
RARBP10826 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.53■□□□□ 0.72
RARBP10826 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.53■□□□□ 0.72
RARBP10826 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.53■□□□□ 0.72
RARBP10826 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.53■□□□□ 0.72
RARBP10826 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.53■□□□□ 0.72
RARBP10826 AC068137.2-201ENST00000605408 478 ntBASIC19.53■□□□□ 0.72
RARBP10826 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RARBP10826 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.53■□□□□ 0.72
RARBP10826 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RARBP10826 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.53■□□□□ 0.72
RARBP10826 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.53■□□□□ 0.72
RARBP10826 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARBP10826 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARBP10826 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RARBP10826 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RARBP10826 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.52■□□□□ 0.72
RARBP10826 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RARBP10826 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RARBP10826 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RARBP10826 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms