Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.41■□□□□ 0.54
ERBB2P04626 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERBB2P04626 AP001269.4-201ENST00000609611 512 ntBASIC18.41■□□□□ 0.54
ERBB2P04626 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERBB2P04626 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERBB2P04626 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERBB2P04626 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ERBB2P04626 AC106820.2-201ENST00000563775 3264 ntBASIC18.41■□□□□ 0.54
ERBB2P04626 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ERBB2P04626 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERBB2P04626 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ERBB2P04626 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERBB2P04626 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ERBB2P04626 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERBB2P04626 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERBB2P04626 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
ERBB2P04626 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
ERBB2P04626 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERBB2P04626 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 HTR7P1-202ENST00000624664 4411 ntBASIC18.4■□□□□ 0.54
ERBB2P04626 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ERBB2P04626 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
ERBB2P04626 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.4■□□□□ 0.54
ERBB2P04626 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.4■□□□□ 0.54
ERBB2P04626 ABCD1P5-201ENST00000445663 754 ntBASIC18.4■□□□□ 0.54
ERBB2P04626 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERBB2P04626 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.4■□□□□ 0.54
ERBB2P04626 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.4■□□□□ 0.54
ERBB2P04626 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.4■□□□□ 0.54
ERBB2P04626 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
ERBB2P04626 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.4■□□□□ 0.54
ERBB2P04626 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.4■□□□□ 0.54
ERBB2P04626 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERBB2P04626 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ERBB2P04626 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERBB2P04626 AC009336.1-201ENST00000608941 1553 ntBASIC18.39■□□□□ 0.53
ERBB2P04626 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ERBB2P04626 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ERBB2P04626 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.39■□□□□ 0.53
ERBB2P04626 KLF4P1-201ENST00000412782 1185 ntBASIC18.39■□□□□ 0.53
ERBB2P04626 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.39■□□□□ 0.53
ERBB2P04626 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.39■□□□□ 0.53
ERBB2P04626 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.39■□□□□ 0.53
ERBB2P04626 STK19B-204ENST00000512515 211 ntBASIC18.39■□□□□ 0.53
ERBB2P04626 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.39■□□□□ 0.53
ERBB2P04626 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.39■□□□□ 0.53
ERBB2P04626 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ERBB2P04626 AL121772.3-201ENST00000610840 674 ntBASIC18.39■□□□□ 0.53
ERBB2P04626 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ERBB2P04626 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.39■□□□□ 0.53
ERBB2P04626 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERBB2P04626 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
ERBB2P04626 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.39■□□□□ 0.53
ERBB2P04626 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.39■□□□□ 0.53
ERBB2P04626 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERBB2P04626 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 AC148477.5-201ENST00000625164 1645 ntBASIC18.38■□□□□ 0.53
ERBB2P04626 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ERBB2P04626 AC003669.1-201ENST00000334569 611 ntBASIC18.38■□□□□ 0.53
ERBB2P04626 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.38■□□□□ 0.53
ERBB2P04626 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.38■□□□□ 0.53
ERBB2P04626 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.38■□□□□ 0.53
ERBB2P04626 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.38■□□□□ 0.53
ERBB2P04626 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERBB2P04626 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms