Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 AC116407.2-201ENST00000613639 860 ntBASIC15.79■□□□□ 0.12
HLA-DPB1P04440 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 AL023973.1-201ENST00000624619 620 ntBASIC15.78■□□□□ 0.12
HLA-DPB1P04440 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DPB1P04440 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 AC132938.6-201ENST00000623828 1655 ntBASIC15.77■□□□□ 0.12
HLA-DPB1P04440 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DPB1P04440 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms