Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
P04436 SLC25A6P5-201ENST00000435663 894 ntBASIC16.02■□□□□ 0.16
P04436 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.02■□□□□ 0.16
P04436 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.02■□□□□ 0.16
P04436 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04436 RNA5SP419-201ENST00000515908 135 ntBASIC16.02■□□□□ 0.16
P04436 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.02■□□□□ 0.16
P04436 STK25P1-201ENST00000585406 838 ntBASIC16.02■□□□□ 0.16
P04436 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.02■□□□□ 0.16
P04436 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04436 BX640515.1-201ENST00000617215 977 ntBASIC16.02■□□□□ 0.16
P04436 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
P04436 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.02■□□□□ 0.16
P04436 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
P04436 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
P04436 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.02■□□□□ 0.15
P04436 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
P04436 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
P04436 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04436 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
P04436 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
P04436 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
P04436 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.01■□□□□ 0.15
P04436 AC004817.3-201ENST00000602957 2129 ntBASIC16.01■□□□□ 0.15
P04436 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.01■□□□□ 0.15
P04436 AL390961.4-201ENST00000623958 2535 ntBASIC16.01■□□□□ 0.15
P04436 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
P04436 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.01■□□□□ 0.15
P04436 LAGE3P1-201ENST00000425356 484 ntBASIC16.01■□□□□ 0.15
P04436 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
P04436 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.01■□□□□ 0.15
P04436 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.01■□□□□ 0.15
P04436 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.01■□□□□ 0.15
P04436 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.01■□□□□ 0.15
P04436 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
P04436 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.01■□□□□ 0.15
P04436 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.01■□□□□ 0.15
P04436 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.01■□□□□ 0.15
P04436 AC107918.4-202ENST00000641623 219 ntBASIC16.01■□□□□ 0.15
P04436 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
P04436 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.01■□□□□ 0.15
P04436 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.01■□□□□ 0.15
P04436 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.01■□□□□ 0.15
P04436 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04436 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
P04436 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
P04436 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
P04436 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16■□□□□ 0.15
P04436 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
P04436 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
P04436 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 IL9RP2-201ENST00000423948 1312 ntBASIC16■□□□□ 0.15
P04436 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
P04436 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04436 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
P04436 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16■□□□□ 0.15
P04436 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04436 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
P04436 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16■□□□□ 0.15
P04436 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16■□□□□ 0.15
P04436 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16■□□□□ 0.15
P04436 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
P04436 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16■□□□□ 0.15
P04436 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16■□□□□ 0.15
P04436 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16■□□□□ 0.15
P04436 AC005104.2-201ENST00000427818 678 ntBASIC16■□□□□ 0.15
P04436 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
P04436 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16■□□□□ 0.15
P04436 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16■□□□□ 0.15
P04436 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms