Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LMNAP02545 RNA5SP416-201ENST00000516838 111 ntBASIC18.34■□□□□ 0.53
LMNAP02545 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LMNAP02545 AC002347.1-201ENST00000569543 541 ntBASIC18.34■□□□□ 0.53
LMNAP02545 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
LMNAP02545 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LMNAP02545 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMNAP02545 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LMNAP02545 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LMNAP02545 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LMNAP02545 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.33■□□□□ 0.53
LMNAP02545 AC104417.2-201ENST00000562989 1793 ntBASIC18.33■□□□□ 0.53
LMNAP02545 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.33■□□□□ 0.52
LMNAP02545 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LMNAP02545 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LMNAP02545 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.33■□□□□ 0.52
LMNAP02545 AP006288.1-201ENST00000446065 395 ntBASIC18.33■□□□□ 0.52
LMNAP02545 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 AC092910.1-201ENST00000482027 1129 ntBASIC18.33■□□□□ 0.52
LMNAP02545 HLA-J-203ENST00000494367 1087 ntBASIC18.33■□□□□ 0.52
LMNAP02545 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.33■□□□□ 0.52
LMNAP02545 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LMNAP02545 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LMNAP02545 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LMNAP02545 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
LMNAP02545 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.32■□□□□ 0.52
LMNAP02545 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.32■□□□□ 0.52
LMNAP02545 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 AL035633.1-201ENST00000406139 838 ntBASIC18.32■□□□□ 0.52
LMNAP02545 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.32■□□□□ 0.52
LMNAP02545 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.32■□□□□ 0.52
LMNAP02545 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 MTDHP5-201ENST00000598980 586 ntBASIC18.32■□□□□ 0.52
LMNAP02545 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.32■□□□□ 0.52
LMNAP02545 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.32■□□□□ 0.52
LMNAP02545 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LMNAP02545 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LMNAP02545 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LMNAP02545 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LMNAP02545 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LMNAP02545 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms