Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD4P01730 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.28■□□□□ 0.68
CD4P01730 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.28■□□□□ 0.68
CD4P01730 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 BCRP1-201ENST00000444246 691 ntBASIC19.28■□□□□ 0.68
CD4P01730 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.28■□□□□ 0.68
CD4P01730 STK19B-204ENST00000512515 211 ntBASIC19.28■□□□□ 0.68
CD4P01730 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.28■□□□□ 0.68
CD4P01730 AC023141.13-201ENST00000604991 943 ntBASIC19.28■□□□□ 0.68
CD4P01730 AC007064.4-201ENST00000637740 555 ntBASIC19.28■□□□□ 0.68
CD4P01730 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
CD4P01730 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD4P01730 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CD4P01730 AC097637.2-201ENST00000624096 1997 ntBASIC19.28■□□□□ 0.68
CD4P01730 AC009113.1-201ENST00000570267 2443 ntBASIC19.27■□□□□ 0.68
CD4P01730 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.27■□□□□ 0.68
CD4P01730 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.27■□□□□ 0.68
CD4P01730 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CD4P01730 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.27■□□□□ 0.68
CD4P01730 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
CD4P01730 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CD4P01730 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.27■□□□□ 0.68
CD4P01730 AC004461.1-201ENST00000412461 403 ntBASIC19.27■□□□□ 0.68
CD4P01730 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.27■□□□□ 0.68
CD4P01730 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.27■□□□□ 0.68
CD4P01730 HLA-J-203ENST00000494367 1087 ntBASIC19.27■□□□□ 0.68
CD4P01730 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.27■□□□□ 0.68
CD4P01730 AC004835.2-201ENST00000603762 682 ntBASIC19.27■□□□□ 0.68
CD4P01730 AC105339.1-204ENST00000636249 355 ntBASIC19.27■□□□□ 0.68
CD4P01730 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD4P01730 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.27■□□□□ 0.68
CD4P01730 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.27■□□□□ 0.68
CD4P01730 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD4P01730 AC020763.4-201ENST00000623414 4170 ntBASIC19.27■□□□□ 0.67
CD4P01730 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.27■□□□□ 0.67
CD4P01730 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD4P01730 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.27■□□□□ 0.67
CD4P01730 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CD4P01730 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD4P01730 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CD4P01730 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CD4P01730 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.26■□□□□ 0.67
CD4P01730 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.26■□□□□ 0.67
CD4P01730 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CD4P01730 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CD4P01730 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.26■□□□□ 0.67
CD4P01730 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.26■□□□□ 0.67
CD4P01730 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.26■□□□□ 0.67
CD4P01730 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CD4P01730 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.26■□□□□ 0.67
CD4P01730 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.26■□□□□ 0.67
CD4P01730 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD4P01730 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.25■□□□□ 0.67
CD4P01730 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.25■□□□□ 0.67
CD4P01730 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.25■□□□□ 0.67
CD4P01730 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.25■□□□□ 0.67
CD4P01730 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.25■□□□□ 0.67
CD4P01730 LINC00982-205ENST00000420957 435 ntBASIC19.25■□□□□ 0.67
CD4P01730 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.25■□□□□ 0.67
CD4P01730 COX20P2-201ENST00000452636 358 ntBASIC19.25■□□□□ 0.67
CD4P01730 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.25■□□□□ 0.67
CD4P01730 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.25■□□□□ 0.67
CD4P01730 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD4P01730 AC093512.1-201ENST00000617969 520 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms