Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 KRT17P2-201ENST00000300992 1314 ntBASIC16.6■□□□□ 0.25
CLPTM1O96005 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.6■□□□□ 0.25
CLPTM1O96005 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLPTM1O96005 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPTM1O96005 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLPTM1O96005 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
CLPTM1O96005 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLPTM1O96005 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 NFIC-211ENST00000641145 8399 ntBASIC16.59■□□□□ 0.25
CLPTM1O96005 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLPTM1O96005 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.59■□□□□ 0.25
CLPTM1O96005 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.59■□□□□ 0.25
CLPTM1O96005 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 NUDT16P1-203ENST00000513809 620 ntBASIC16.59■□□□□ 0.25
CLPTM1O96005 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.59■□□□□ 0.25
CLPTM1O96005 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.59■□□□□ 0.25
CLPTM1O96005 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
CLPTM1O96005 AC131212.4-201ENST00000623606 975 ntBASIC16.59■□□□□ 0.25
CLPTM1O96005 AL031985.4-201ENST00000642138 673 ntBASIC16.59■□□□□ 0.25
CLPTM1O96005 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLPTM1O96005 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLPTM1O96005 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.59■□□□□ 0.25
CLPTM1O96005 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLPTM1O96005 AC060834.1-201ENST00000443027 2032 ntBASIC16.58■□□□□ 0.25
CLPTM1O96005 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLPTM1O96005 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLPTM1O96005 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.58■□□□□ 0.25
CLPTM1O96005 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLPTM1O96005 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLPTM1O96005 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLPTM1O96005 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLPTM1O96005 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.58■□□□□ 0.25
CLPTM1O96005 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLPTM1O96005 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLPTM1O96005 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.58■□□□□ 0.24
CLPTM1O96005 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.58■□□□□ 0.24
CLPTM1O96005 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 AL355075.4-201ENST00000554988 638 ntBASIC16.58■□□□□ 0.24
CLPTM1O96005 AL160286.2-201ENST00000567150 934 ntBASIC16.58■□□□□ 0.24
CLPTM1O96005 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CLPTM1O96005 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.58■□□□□ 0.24
CLPTM1O96005 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLPTM1O96005 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLPTM1O96005 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CLPTM1O96005 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.57■□□□□ 0.24
CLPTM1O96005 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.57■□□□□ 0.24
CLPTM1O96005 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 AL513523.2-202ENST00000427283 2040 ntBASIC16.57■□□□□ 0.24
CLPTM1O96005 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLPTM1O96005 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms