Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.24■□□□□ 0.51
LRCH4O75427 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCH4O75427 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LRCH4O75427 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRCH4O75427 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRCH4O75427 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
LRCH4O75427 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 RCN1P2-201ENST00000398357 915 ntBASIC18.23■□□□□ 0.51
LRCH4O75427 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.23■□□□□ 0.51
LRCH4O75427 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRCH4O75427 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.23■□□□□ 0.51
LRCH4O75427 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
LRCH4O75427 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRCH4O75427 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LRCH4O75427 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRCH4O75427 PCDHA12-202ENST00000613593 2588 ntBASIC18.22■□□□□ 0.51
LRCH4O75427 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 AC132938.5-201ENST00000624980 1813 ntBASIC18.22■□□□□ 0.51
LRCH4O75427 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LRCH4O75427 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
LRCH4O75427 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 AC104819.1-201ENST00000504587 486 ntBASIC18.22■□□□□ 0.51
LRCH4O75427 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 AC012615.1-201ENST00000565797 1299 ntBASIC18.22■□□□□ 0.51
LRCH4O75427 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.22■□□□□ 0.51
LRCH4O75427 AC092329.2-201ENST00000598402 547 ntBASIC18.22■□□□□ 0.51
LRCH4O75427 AC114341.1-201ENST00000618070 349 ntBASIC18.22■□□□□ 0.51
LRCH4O75427 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCH4O75427 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.22■□□□□ 0.51
LRCH4O75427 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
LRCH4O75427 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH4O75427 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LRCH4O75427 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRCH4O75427 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH4O75427 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH4O75427 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.21■□□□□ 0.51
LRCH4O75427 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRCH4O75427 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH4O75427 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.21■□□□□ 0.51
LRCH4O75427 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LRCH4O75427 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.21■□□□□ 0.51
LRCH4O75427 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.21■□□□□ 0.51
LRCH4O75427 AC093458.2-201ENST00000623150 629 ntBASIC18.21■□□□□ 0.51
LRCH4O75427 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms