Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 COX5BP2-201ENST00000392354 334 ntBASIC16.55■□□□□ 0.24
PLOD3O60568 AP002383.4-201ENST00000442518 975 ntBASIC16.55■□□□□ 0.24
PLOD3O60568 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 VENTXP7-201ENST00000475503 772 ntBASIC16.55■□□□□ 0.24
PLOD3O60568 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 AC005336.2-201ENST00000593183 939 ntBASIC16.55■□□□□ 0.24
PLOD3O60568 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PLOD3O60568 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PLOD3O60568 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.55■□□□□ 0.24
PLOD3O60568 NFIC-211ENST00000641145 8399 ntBASIC16.54■□□□□ 0.24
PLOD3O60568 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 PCDHA12-202ENST00000613593 2588 ntBASIC16.54■□□□□ 0.24
PLOD3O60568 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PLOD3O60568 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PLOD3O60568 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.54■□□□□ 0.24
PLOD3O60568 KRT18P1-202ENST00000452408 1331 ntBASIC16.54■□□□□ 0.24
PLOD3O60568 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 AC124067.4-201ENST00000519691 2379 ntBASIC16.54■□□□□ 0.24
PLOD3O60568 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PLOD3O60568 AC005104.2-201ENST00000427818 678 ntBASIC16.54■□□□□ 0.24
PLOD3O60568 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.54■□□□□ 0.24
PLOD3O60568 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.54■□□□□ 0.24
PLOD3O60568 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.54■□□□□ 0.24
PLOD3O60568 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.54■□□□□ 0.24
PLOD3O60568 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 AC010460.3-201ENST00000511359 1579 ntBASIC16.54■□□□□ 0.24
PLOD3O60568 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.54■□□□□ 0.24
PLOD3O60568 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PLOD3O60568 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PLOD3O60568 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PLOD3O60568 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PLOD3O60568 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.53■□□□□ 0.24
PLOD3O60568 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.53■□□□□ 0.24
PLOD3O60568 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PLOD3O60568 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.53■□□□□ 0.24
PLOD3O60568 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.53■□□□□ 0.24
PLOD3O60568 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.53■□□□□ 0.24
PLOD3O60568 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.53■□□□□ 0.24
PLOD3O60568 TPSP2-201ENST00000561760 610 ntBASIC16.53■□□□□ 0.24
PLOD3O60568 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.53■□□□□ 0.24
PLOD3O60568 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.53■□□□□ 0.24
PLOD3O60568 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.53■□□□□ 0.24
PLOD3O60568 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.53■□□□□ 0.24
PLOD3O60568 AC069148.1-201ENST00000608741 768 ntBASIC16.53■□□□□ 0.24
PLOD3O60568 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PLOD3O60568 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.53■□□□□ 0.24
PLOD3O60568 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.53■□□□□ 0.24
PLOD3O60568 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PLOD3O60568 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms