Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL020989.1-201ENST00000422979 469 ntBASIC18.2■□□□□ 0.5
MSI1O43347 AC079776.4-201ENST00000511039 504 ntBASIC18.2■□□□□ 0.5
MSI1O43347 STK19B-204ENST00000512515 211 ntBASIC18.2■□□□□ 0.5
MSI1O43347 RNA5SP419-201ENST00000515908 135 ntBASIC18.2■□□□□ 0.5
MSI1O43347 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.2■□□□□ 0.5
MSI1O43347 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.2■□□□□ 0.5
MSI1O43347 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 AL773604.1-201ENST00000617417 272 ntBASIC18.2■□□□□ 0.5
MSI1O43347 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 SIGLEC16-201ENST00000599858 1437 ntBASIC18.2■□□□□ 0.5
MSI1O43347 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MSI1O43347 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MSI1O43347 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MSI1O43347 HLA-J-201ENST00000462773 1622 ntBASIC18.2■□□□□ 0.5
MSI1O43347 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.19■□□□□ 0.5
MSI1O43347 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.19■□□□□ 0.5
MSI1O43347 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 GNAS-203ENST00000306120 1878 ntBASIC18.19■□□□□ 0.5
MSI1O43347 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MSI1O43347 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
MSI1O43347 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.19■□□□□ 0.5
MSI1O43347 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.19■□□□□ 0.5
MSI1O43347 AL662844.1-201ENST00000546340 181 ntBASIC18.19■□□□□ 0.5
MSI1O43347 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.19■□□□□ 0.5
MSI1O43347 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.19■□□□□ 0.5
MSI1O43347 LINC01451-201ENST00000623792 534 ntBASIC18.19■□□□□ 0.5
MSI1O43347 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
MSI1O43347 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.19■□□□□ 0.5
MSI1O43347 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
MSI1O43347 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.19■□□□□ 0.5
MSI1O43347 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
MSI1O43347 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MSI1O43347 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
MSI1O43347 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
MSI1O43347 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
MSI1O43347 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MSI1O43347 AC009336.1-201ENST00000608941 1553 ntBASIC18.18■□□□□ 0.5
MSI1O43347 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.18■□□□□ 0.5
MSI1O43347 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.18■□□□□ 0.5
MSI1O43347 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.18■□□□□ 0.5
MSI1O43347 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.18■□□□□ 0.5
MSI1O43347 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.18■□□□□ 0.5
MSI1O43347 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MSI1O43347 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.18■□□□□ 0.5
MSI1O43347 AL031284.1-201ENST00000419297 478 ntBASIC18.18■□□□□ 0.5
MSI1O43347 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.18■□□□□ 0.5
MSI1O43347 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.18■□□□□ 0.5
MSI1O43347 MIR7706-201ENST00000613747 67 ntBASIC18.18■□□□□ 0.5
MSI1O43347 AL022326.1-202ENST00000641533 845 ntBASIC18.18■□□□□ 0.5
MSI1O43347 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 AC133963.1-201ENST00000504166 1679 ntBASIC18.18■□□□□ 0.5
MSI1O43347 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.18■□□□□ 0.5
MSI1O43347 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MSI1O43347 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.17■□□□□ 0.5
MSI1O43347 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
MSI1O43347 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.17■□□□□ 0.5
MSI1O43347 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MSI1O43347 MYCLP1-201ENST00000372451 1075 ntBASIC18.17■□□□□ 0.5
MSI1O43347 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
MSI1O43347 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms