Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC28A1O00337 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC28A1O00337 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.89■□□□□ 0.3
SLC28A1O00337 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC28A1O00337 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC28A1O00337 GUSBP12-201ENST00000513727 720 ntBASIC16.89■□□□□ 0.29
SLC28A1O00337 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC28A1O00337 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC28A1O00337 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC28A1O00337 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC28A1O00337 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SLC28A1O00337 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC28A1O00337 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.29
SLC28A1O00337 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC28A1O00337 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC28A1O00337 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 NKILA-202ENST00000614771 2598 ntBASIC16.88■□□□□ 0.29
SLC28A1O00337 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC28A1O00337 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC28A1O00337 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SLC28A1O00337 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC28A1O00337 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SLC28A1O00337 IGHV3-52-201ENST00000519770 353 ntBASIC16.88■□□□□ 0.29
SLC28A1O00337 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLC28A1O00337 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC28A1O00337 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC28A1O00337 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC28A1O00337 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A1O00337 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SLC28A1O00337 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC28A1O00337 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC28A1O00337 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC28A1O00337 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC28A1O00337 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
SLC28A1O00337 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC28A1O00337 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC28A1O00337 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC28A1O00337 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC28A1O00337 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A1O00337 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms