Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TLR4O00206 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR4O00206 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR4O00206 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR4O00206 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR4O00206 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TLR4O00206 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TLR4O00206 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR4O00206 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.35■□□□□ 0.37
TLR4O00206 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.35■□□□□ 0.37
TLR4O00206 AC064836.3-201ENST00000607928 673 ntBASIC17.35■□□□□ 0.37
TLR4O00206 AC116407.2-201ENST00000613639 860 ntBASIC17.35■□□□□ 0.37
TLR4O00206 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR4O00206 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TLR4O00206 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.35■□□□□ 0.37
TLR4O00206 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR4O00206 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TLR4O00206 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.34■□□□□ 0.37
TLR4O00206 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.34■□□□□ 0.37
TLR4O00206 AC023274.1-201ENST00000418278 595 ntBASIC17.34■□□□□ 0.37
TLR4O00206 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TLR4O00206 SIGLEC30P-201ENST00000455569 941 ntBASIC17.34■□□□□ 0.37
TLR4O00206 AC068880.1-201ENST00000507289 2297 ntBASIC17.34■□□□□ 0.37
TLR4O00206 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR4O00206 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TLR4O00206 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR4O00206 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR4O00206 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR4O00206 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TLR4O00206 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TLR4O00206 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR4O00206 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TLR4O00206 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.33■□□□□ 0.37
TLR4O00206 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.33■□□□□ 0.37
TLR4O00206 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms