Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC188H7C350 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC188H7C350 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 TSPY7P-201ENST00000431358 1114 ntBASIC18.23■□□□□ 0.51
CCDC188H7C350 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC188H7C350 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC188H7C350 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC188H7C350 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
CCDC188H7C350 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 AC004263.2-201ENST00000617183 678 ntBASIC18.23■□□□□ 0.51
CCDC188H7C350 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC188H7C350 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC188H7C350 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC188H7C350 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC188H7C350 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCDC188H7C350 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC188H7C350 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC188H7C350 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC188H7C350 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC188H7C350 AC124947.2-201ENST00000547118 1133 ntBASIC18.22■□□□□ 0.51
CCDC188H7C350 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC188H7C350 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCDC188H7C350 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC188H7C350 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC188H7C350 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 AC092053.1-201ENST00000605787 1936 ntBASIC18.21■□□□□ 0.51
CCDC188H7C350 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC188H7C350 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 MIR718-201ENST00000390190 70 ntBASIC18.21■□□□□ 0.51
CCDC188H7C350 AC096633.1-201ENST00000422446 749 ntBASIC18.21■□□□□ 0.51
CCDC188H7C350 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 FAM87A-204ENST00000613235 858 ntBASIC18.21■□□□□ 0.51
CCDC188H7C350 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC188H7C350 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC188H7C350 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC188H7C350 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC188H7C350 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.2■□□□□ 0.5
CCDC188H7C350 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms