Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC021087.4-201ENST00000563761 564 ntBASIC16■□□□□ 0.15
NPIPA2E9PIF3 AC139887.3-201ENST00000568585 713 ntBASIC16■□□□□ 0.15
NPIPA2E9PIF3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16■□□□□ 0.15
NPIPA2E9PIF3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16■□□□□ 0.15
NPIPA2E9PIF3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NPIPA2E9PIF3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16■□□□□ 0.15
NPIPA2E9PIF3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NPIPA2E9PIF3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPA2E9PIF3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16■□□□□ 0.15
NPIPA2E9PIF3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 RPS2P1-201ENST00000434010 821 ntBASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 SLC25A6P5-201ENST00000435663 894 ntBASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 MIR7706-201ENST00000613747 67 ntBASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
NPIPA2E9PIF3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AC097374.2-201ENST00000618617 1306 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 MIR574-201ENST00000385209 96 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 PMS2P1-201ENST00000431037 1228 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AL671883.3-201ENST00000603274 991 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AC023511.2-201ENST00000618803 211 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 AC116407.3-201ENST00000623905 1129 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPA2E9PIF3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms