Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 AL139327.4-201ENST00000612362 153 ntBASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 AC093458.2-201ENST00000623150 629 ntBASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 NSUN5P1-202ENST00000421140 1535 ntBASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC162PA2VCL2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 IGHV3-47-201ENST00000425060 335 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 ATP5G2P1-201ENST00000433580 426 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 MINOS1P3-201ENST00000457048 203 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AP000867.3-201ENST00000524675 377 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AC074051.2-201ENST00000565115 352 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AC011467.2-201ENST00000598425 242 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 TP73-AS1-210ENST00000637775 1455 ntBASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC162PA2VCL2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 AL391005.1-201ENST00000623953 2435 ntBASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 AL049757.1-201ENST00000616842 1596 ntBASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC162PA2VCL2 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms