Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PMPCAP1-201ENST00000508114 1576 ntBASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 TSPY19P-201ENST00000418461 509 ntBASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 TSPY18P-201ENST00000441642 509 ntBASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 ABCD1P5-201ENST00000445663 754 ntBASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 AP000867.4-201ENST00000641616 219 ntBASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC196A0A1B0GTZ2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 KRT18P31-201ENST00000506277 1292 ntBASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC073592.5-201ENST00000624854 528 ntBASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC196A0A1B0GTZ2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 KRT18P56-201ENST00000507275 550 ntBASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 STK19B-204ENST00000512515 211 ntBASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC091304.2-201ENST00000564639 760 ntBASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC046185.3-201ENST00000623228 1824 ntBASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC132938.5-201ENST00000624980 1813 ntBASIC20.37■□□□□ 0.85
CCDC196A0A1B0GTZ2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms