Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC004817.3-201ENST00000602957 2129 ntBASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 ACTG1P4-201ENST00000425123 1122 ntBASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRBV5-4A0A0C4DH59 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.21■□□□□ 0.34
TRBV5-4A0A0C4DH59 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 SART3-203ENST00000546611 1184 ntBASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 AC093525.9-201ENST00000624961 1746 ntBASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV5-4A0A0C4DH59 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 AL450487.1-201ENST00000426799 995 ntBASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 BX005266.1-201ENST00000473402 457 ntBASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 AL022326.1-202ENST00000641533 845 ntBASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-4A0A0C4DH59 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms