Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN10AQ9Y5Y9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 AL355306.1-201ENST00000415580 579 ntBASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 AC092364.2-202ENST00000597012 1073 ntBASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN10AQ9Y5Y9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 AP001059.3-201ENST00000619053 235 ntBASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 AL139327.4-201ENST00000612362 153 ntBASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 LINC01451-201ENST00000623792 534 ntBASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN10AQ9Y5Y9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN10AQ9Y5Y9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN10AQ9Y5Y9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN10AQ9Y5Y9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN10AQ9Y5Y9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN10AQ9Y5Y9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms